Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
ATAC-seq
3
Hi-C
Assay category
4
DNA accessibility
3
3D chromatin structure
Date released
4
February, 2021
February, 2023
3
October, 2022
Available data
3392
bam
3126
bigWig
1712
bed narrowPeak
1584
tsv
1282
fastq
1042
bigBed narrowPeak
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
269
bed bed3+
154
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
8
csv
5
hdf5
4
bed bedgraph
4
tar
3
cool
2
bed bed3
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
7
Homo sapiens
Biosample type
4
in vitro differentiated cells
3
primary cell
Organ
4
connective tissue
3
epithelium
3
pancreas
Project
4
AMP
3
HPAP
Genome assembly (visualization)
7
hg19
Lab
4
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
3
audit script error
month_released!
February, 2023
BIOSAMPLE
ASSAY
7 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
Hi-C
in vitro differentiated cells
adipocyte
4
primary cell
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
Download