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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
Hi-C
2
single cell RNA-seq
Assay category
3
3D chromatin structure
2
Transcription
Date released
3
October, 2022
1
November, 2018
1
September, 2018
Available data
1485
bam
1397
bigWig
981
fastq
833
bed narrowPeak
524
tsv
481
bigBed narrowPeak
160
tagAlign
153
zippedFastqFolder
109
bed broadPeak
109
bigBed broadPeak
68
bed bed3+
13
bedpe bed3+
12
hic
11
bed bedMethyl
11
bigBed bedMethyl
7
bed bed3
7
bed bedgraph
5
hdf5
4
tar
4
txt
3
cool
2
csv
2
ibed
1
vcf
Organism
5
Homo sapiens
Biosample type
tissue
5
primary cell
Organ
3
epithelium
3
pancreas
Project
3
HPAP
2
AMP
Genome assembly (visualization)
3
hg19
Lab
3
Klaus Kaestner, Upenn
2
AMP-T2D consortium
Audit category:
3
audit script error
biosample_type!
tissue
BIOSAMPLE
ASSAY
5 results
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Hi-C
single cell RNA-seq
primary cell
pancreatic cell
2
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
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