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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
Hi-C
Assay category
6
3D chromatin structure
Date released
3
October, 2022
2
July, 2019
1
October, 2019
Available data
3212
bam
2979
bigWig
1648
bed narrowPeak
1532
tsv
1355
fastq
963
bigBed narrowPeak
392
tagAlign
309
bed broadPeak
272
bigBed broadPeak
262
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
35
bed bedMethyl
35
bigBed bedMethyl
21
bedpe bed3+
20
hic
12
bed bed3
8
csv
7
bed bedgraph
3
cool
3
hdf5
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
6
Homo sapiens
Biosample type
5
primary cell
1
cell line
Organ
5
epithelium
4
pancreas
3
brain
blood vessel
2
vasculature
1
connective tissue
1
liver
Project
3
AMP
3
HPAP
Genome assembly (visualization)
6
hg19
1
GRCh38
Lab
3
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
3
audit script error
Audit category:
1
inconsistent assembly
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
6 results
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Hi-C
primary cell
astrocyte of the cerebellum
1
brain pericyte
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
cell line
Panc1
1
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