Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
ChIP-seq
3
Hi-C
Assay category
84
DNA binding
3
3D chromatin structure
Target of assay
84
histone
84
histone modification
44
broad histone mark
40
narrow histone mark
Date released
84
May, 2021
3
October, 2022
Available data
310
bigWig
274
bed narrowPeak
205
bam
195
fastq
153
zippedFastqFolder
112
tsv
84
tagAlign
66
txt
64
xls
7
hic
5
bedpe bed3+
4
bed bed3+
3
bed bedgraph
3
cool
2
bed broadPeak
1
bedpe
1
vcf
Organism
87
Homo sapiens
Biosample type
87
primary cell
Organ
3
epithelium
3
pancreas
Project
84
T1D
3
HPAP
Genome assembly (visualization)
87
hg19
84
GRCh38
Lab
AMP-T2D consortium
84
Kyle Gaulton, UCSD
3
Klaus Kaestner, Upenn
Audit category:
3
audit script error
audit.NOT_COMPLIANT.category!
missing controlled_by
lab.title!
AMP-T2D consortium
BIOSAMPLE
ASSAY
87 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
Hi-C
primary cell
monocyte
84
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
Download