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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
Hi-C
1
FAIRE-seq
Assay category
3
3D chromatin structure
1
DNA accessibility
Date released
3
October, 2022
1
October, 2019
Available data
2711
bam
2507
bigWig
1426
tsv
1336
bed narrowPeak
893
fastq
684
bigBed narrowPeak
312
tagAlign
260
bed bed3+
259
bed broadPeak
222
bigBed broadPeak
161
txt
153
zippedFastqFolder
64
xls
33
bed bedMethyl
33
bigBed bedMethyl
21
bedpe bed3+
21
hic
11
bed bed3
7
bed bedgraph
7
csv
4
hdf5
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
tar
Organism
4
Homo sapiens
Biosample type
4
primary cell
Organ
4
epithelium
liver
3
pancreas
1
blood vessel
1
vasculature
1
vein
Project
3
HPAP
1
AMP
Genome assembly (visualization)
4
hg19
Lab
3
Klaus Kaestner, Upenn
1
AMP-T2D consortium
Audit category:
3
audit script error
organ_slims!
liver
BIOSAMPLE
ASSAY
4 results
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Hi-C
FAIRE-seq
primary cell
endothelial cell of umbilical vein
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
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