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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ChIP-seq
3
single cell RNA-seq
1
FAIRE-seq
Assay category
3
DNA binding
3
Transcription
1
DNA accessibility
Target of assay
3
transcription factor
1
RNA binding protein
Date released
3
November, 2017
1
February, 2021
1
November, 2018
1
October, 2019
1
September, 2018
Available data
3392
bam
3169
bigWig
1817
bed narrowPeak
1591
tsv
1331
fastq
1042
bigBed narrowPeak
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
272
bed bed3+
155
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
20
bedpe bed3+
19
hic
12
bed bed3
7
bed bedgraph
5
hdf5
4
tar
3
csv
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
7
Homo sapiens
Biosample type
3
cell line
3
primary cell
1
tissue
Organ
4
liver
1
blood vessel
1
epithelium
1
vasculature
1
vein
Project
7
AMP
Genome assembly (visualization)
4
hg19
Lab
7
AMP-T2D consortium
Audit category:
audit script error
audit.ERROR.category!
audit script error
BIOSAMPLE
ASSAY
7 results
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ChIP-seq
single cell RNA-seq
FAIRE-seq
cell line
HepG2
3
primary cell
pancreatic cell
2
endothelial cell of umbilical vein
1
tissue
liver
1
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