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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
RRBS
8
single cell RNA-seq
Assay category
19
DNA methylation
8
Transcription
Date released
15
July, 2019
6
February, 2021
4
August, 2017
1
November, 2018
1
September, 2018
Available data
3392
bam
bigWig
1777
bed narrowPeak
1600
tsv
1358
fastq
1042
bigBed narrowPeak
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
273
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
27
Homo sapiens
Biosample type
15
tissue
12
primary cell
Organ
9
kidney
6
epithelium
3
liver
3
musculature of body
2
brain
2
heart
2
pancreas
1
connective tissue
1
eye
1
pericardium
1
vasculature
Project
27
AMP
Genome assembly (visualization)
19
hg19
Lab
27
AMP-T2D consortium
Audit category:
5
audit script error
2
inconsistent ontology term
files.file_type!
bigWig
BIOSAMPLE
ASSAY
27 results
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Clear Filters
RRBS
single cell RNA-seq
tissue
kidney
1
5
liver
1
1
skeletal muscle tissue
2
brain
1
heart left ventricle
1
+ See 3 more…
primary cell
pancreatic cell
2
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
+ See 6 more…
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