Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
RRBS
17
WGBS
8
single cell RNA-seq
Assay category
34
DNA methylation
8
Transcription
Date released
21
July, 2019
8
November, 2018
6
August, 2017
6
February, 2021
1
September, 2018
Available data
3149
bam
2947
bigWig
1614
bed narrowPeak
1574
tsv
1337
fastq
915
bigBed narrowPeak
280
tagAlign
275
bed broadPeak
247
bigBed broadPeak
238
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
34
bed bedMethyl
34
bigBed bedMethyl
23
bedpe bed3+
23
hic
11
bed bed3
8
csv
7
bed bedgraph
4
tar
3
cool
2
hdf5
2
ibed
1
bedpe
1
vcf
Organism
42
Homo sapiens
Biosample type
30
tissue
11
primary cell
1
cell line
Organ
9
kidney
8
heart
6
epithelium
6
pancreas
4
liver
4
musculature of body
3
connective tissue
2
adipose tissue
brain
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
42
AMP
Genome assembly (visualization)
17
GRCh38
17
hg19
Lab
42
AMP-T2D consortium
Audit category:
5
audit script error
2
inconsistent ontology term
organ_slims!
brain
BIOSAMPLE
ASSAY
42 results
search-icon
table-tab-icon
Clear Filters
RRBS
WGBS
single cell RNA-seq
tissue
kidney
1
5
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
+ See 10 more…
primary cell
pancreatic cell
2
cardiac fibroblast
1
cardiac muscle cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
cell line
HepG2
1
See all biosamples
Download