Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
RRBS
16
WGBS
8
single cell RNA-seq
Assay category
32
DNA methylation
8
Transcription
Date released
21
July, 2019
8
November, 2018
6
February, 2021
4
August, 2017
1
September, 2018
Available data
3335
bam
3061
bigWig
1717
bed narrowPeak
1591
tsv
1356
fastq
995
bigBed narrowPeak
383
tagAlign
276
bed broadPeak
252
bigBed broadPeak
239
bed bed3+
160
txt
153
zippedFastqFolder
64
xls
32
bed bedMethyl
32
bigBed bedMethyl
21
bedpe bed3+
21
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
40
Homo sapiens
Biosample type
28
tissue
11
primary cell
1
cell line
Organ
9
kidney
8
heart
6
epithelium
6
pancreas
4
liver
musculature of body
3
connective tissue
2
adipose tissue
2
brain
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
40
AMP
Genome assembly (visualization)
16
GRCh38
16
hg19
Lab
40
AMP-T2D consortium
Audit category:
5
audit script error
2
inconsistent ontology term
organ_slims!
musculature of body
BIOSAMPLE
ASSAY
40 results
search-icon
table-tab-icon
Clear Filters
RRBS
WGBS
single cell RNA-seq
tissue
kidney
1
5
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
+ See 9 more…
primary cell
pancreatic cell
2
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
+ See 5 more…
cell line
HepG2
1
See all biosamples
Download