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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
single cell RNA-seq
1
Hi-C
Assay category
1
3D chromatin structure
Date released
July, 2019
1
October, 2019
Available data
3213
bam
2987
bigWig
1810
bed narrowPeak
1333
tsv
1230
fastq
1040
bigBed narrowPeak
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
269
bed bed3+
148
txt
101
zippedFastqFolder
64
xls
23
bedpe bed3+
23
hic
13
bed bedMethyl
13
bigBed bedMethyl
12
bed bed3
7
bed bedgraph
4
tar
3
cool
2
ibed
1
bedpe
1
hdf5
1
tagAlign bed3+
1
vcf
0
csv
Organism
1
Homo sapiens
Biosample type
1
cell line
Organ
1
pancreas
Project
1
AMP
Genome assembly (visualization)
1
GRCh38
1
hg19
Lab
1
AMP-T2D consortium
Audit category:
1
inconsistent assembly
assay_title!
single cell RNA-seq
month_released!
July, 2019
BIOSAMPLE
ASSAY
1 results
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Hi-C
cell line
Panc1
1
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