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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
single cell RNA-seq
1
Hi-C
Assay category
6
Transcription
1
3D chromatin structure
Date released
6
February, 2021
1
October, 2019
Available data
2783
bam
2516
bigWig
1482
bed narrowPeak
1330
tsv
949
fastq
933
bigBed narrowPeak
298
tagAlign
273
bed broadPeak
236
bed bed3+
236
bigBed broadPeak
161
txt
64
xls
26
bed bedMethyl
26
bigBed bedMethyl
19
bedpe bed3+
17
hic
11
bed bed3
7
bed bedgraph
6
csv
3
tar
2
ibed
1
bedpe
1
hdf5
1
tagAlign bed3+
1
vcf
Organism
7
Homo sapiens
Biosample type
primary cell
6
tissue
1
cell line
Organ
5
kidney
1
liver
1
pancreas
Project
7
AMP
Genome assembly (visualization)
1
GRCh38
1
hg19
Lab
7
AMP-T2D consortium
Audit category:
5
audit script error
Audit category:
1
inconsistent assembly
biosample_type!
primary cell
BIOSAMPLE
ASSAY
7 results
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single cell RNA-seq
Hi-C
tissue
kidney
5
liver
1
cell line
Panc1
1
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