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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
single cell RNA-seq
2
pCHi-C
Assay category
7
Transcription
Date released
5
February, 2021
2
March, 2020
1
November, 2018
1
September, 2018
Available data
2711
bam
2547
bigWig
1426
tsv
1376
bed narrowPeak
893
fastq
684
bigBed narrowPeak
312
tagAlign
260
bed bed3+
259
bed broadPeak
222
bigBed broadPeak
161
txt
zippedFastqFolder
64
xls
33
bed bedMethyl
33
bigBed bedMethyl
21
bedpe bed3+
21
hic
11
bed bed3
7
bed bedgraph
7
csv
4
hdf5
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
tar
Organism
9
Homo sapiens
Biosample type
5
tissue
2
in vitro differentiated cells
2
primary cell
Organ
5
kidney
liver
Project
9
AMP
Genome assembly (visualization)
2
hg19
Lab
9
AMP-T2D consortium
Audit category:
5
audit script error
2
inconsistent ontology term
organ_slims!
liver
files.file_type!
zippedFastqFolder
BIOSAMPLE
ASSAY
9 results
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single cell RNA-seq
pCHi-C
tissue
kidney
5
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
primary cell
pancreatic cell
2
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