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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1508
ChIP-seq
1382
total RNA-seq
209
DNase-seq
155
ATAC-seq
136
single cell RNA-seq
27
snATAC-seq
25
WGBS
18
small RNA-seq
6
Hi-C
5
FAIRE-seq
5
GRO-seq
4
RRBS
1
pCHi-C
Assay category
136
Transcription
Target of assay
3
control
Date released
48
July, 2018
43
April, 2018
22
September, 2020
12
February, 2021
3
August, 2018
3
July, 2019
3
June, 2018
1
November, 2018
1
September, 2018
Available data
205
tsv
128
fastq
100
bam
100
bigWig
52
zippedFastqFolder
13
txt
8
csv
Organism
136
Homo sapiens
Biosample type
136
primary cell
Organ
74
pancreas
70
epithelium
4
connective tissue
3
brain
Project
102
AMP
34
HPAP
Genome assembly (visualization)
100
GRCh38
100
hg19
Lab
102
AMP-T2D consortium
34
Klaus Kaestner, Upenn
Audit category:
7
inconsistent ontology term
BIOSAMPLE
ASSAY
136 results
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single cell RNA-seq
primary cell
Langerhans cell
34
pancreatic acinar cell
12
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
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