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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
98
total RNA-seq
34
single cell RNA-seq
27
snATAC-seq
18
ATAC-seq
6
WGBS
Assay category
132
Transcription
45
DNA accessibility
6
DNA methylation
Date released
76
February, 2023
45
February, 2021
38
September, 2020
24
May, 2022
Available data
183
fastq
153
zippedFastqFolder
86
bed narrowPeak
79
bigWig
66
txt
24
bam
16
tsv
6
hic
5
bedpe bed3+
4
bed bed3+
3
bed bedgraph
3
cool
1
bedpe
1
vcf
Organism
183
Homo sapiens
Biosample type
159
primary cell
24
tissue
Organ
83
pancreas
59
epithelium
Project
159
HPAP
24
AMP
Genome assembly (visualization)
19
hg19
GRCh38
Lab
AMP-T2D consortium
159
Klaus Kaestner, Upenn
24
Kyle Gaulton, UCSD
Mark McCarthy, Oxford
Audit category:
27
audit script error
assembly!
GRCh38
lab.title!
Mark McCarthy, Oxford
AMP-T2D consortium
BIOSAMPLE
ASSAY
183 results
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total RNA-seq
single cell RNA-seq
snATAC-seq
ATAC-seq
WGBS
primary cell
Langerhans cell
34
27
pancreatic alpha cell
42
6
exocrine cell
39
pancreatic beta cell
11
tissue
islet of Langerhans
6
18
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