Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
140
total RNA-seq
128
single cell RNA-seq
Assay category
637
DNA binding
268
Transcription
61
DNA accessibility
8
DNA methylation
1
3D chromatin structure
Date released
76
February, 2023
48
July, 2018
38
April, 2018
38
September, 2020
27
September, 2018
15
February, 2018
12
February, 2021
5
January, 2019
3
August, 2018
3
June, 2018
2
October, 2018
1
November, 2018
Available data
494
tsv
485
bigWig
483
bam
268
fastq
52
zippedFastqFolder
2
bed bed3+
2
csv
Organism
268
Homo sapiens
Biosample type
248
primary cell
tissue
15
in vitro differentiated cells
5
cell line
Organ
150
pancreas
147
epithelium
5
liver
4
embryo
3
connective tissue
Project
142
AMP
126
HPAP
Genome assembly (visualization)
140
GRCh38
140
hg19
Lab
142
AMP-T2D consortium
126
Klaus Kaestner, Upenn
Audit category:
7
inconsistent ontology term
biosample_type!
tissue
BIOSAMPLE
ASSAY
268 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
single cell RNA-seq
primary cell
pancreatic alpha cell
52
12
exocrine cell
39
Langerhans cell
34
pancreatic beta cell
21
12
pancreatic acinar cell
4
9
+ See 13 more…
in vitro differentiated cells
pancreatic endoderm
4
definitive endodermal cell
2
embryonic stem cell
2
endocrine cell
2
posterior foregut
2
+ See 2 more…
cell line
HepG2
5
See all biosamples
Download