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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ChIP-seq
3
Hi-C
Assay category
3
3D chromatin structure
3
DNA binding
Target of assay
1
RNA binding protein
1
control
1
histone
1
histone modification
1
narrow histone mark
1
transcription factor
Date released
3
November, 2017
2
March, 2020
1
October, 2019
Available data
180
bam
150
bigWig
129
bed narrowPeak
79
bigBed narrowPeak
68
tsv
13
bed broadPeak
13
bigBed broadPeak
11
bed bed3+
6
tagAlign
3
fastq
3
hic
2
bedpe bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
6
Homo sapiens
Biosample type
5
primary cell
1
tissue
Organ
478
pancreas
467
liver
263
epithelium
101
connective tissue
60
blood
60
bodily fluid
44
adipose tissue
27
embryo
24
spleen
21
brain
9
vasculature
6
blood vessel
4
musculature of body
3
heart
2
vein
1
kidney
Project
6
AMP
Genome assembly (visualization)
6
hg19
2
GRCh38
Lab
6
AMP-T2D consortium
Audit category:
1
audit script error
BIOSAMPLE
ASSAY
6 results
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ChIP-seq
Hi-C
primary cell
brain microvascular endothelial cell
3
endothelial cell of umbilical vein
2
tissue
aorta
1
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