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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
ChIP-seq
3
single cell RNA-seq
1
ATAC-seq
1
DNase-seq
1
pCHi-C
Assay category
5
DNA binding
3
Transcription
2
DNA accessibility
Target of assay
control
5
RNA binding protein
5
transcription factor
Date released
August, 2017
5
October, 2018
2
July, 2018
1
April, 2018
1
August, 2018
1
November, 2018
1
October, 2017
Available data
505
bigWig
501
bam
478
tsv
29
bed narrowPeak
25
bigBed narrowPeak
16
bed bed3+
11
fastq
8
bed broadPeak
8
bigBed broadPeak
6
bed bed3
4
bed bedgraph
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
hdf5
Organism
11
Homo sapiens
Biosample type
7
tissue
3
primary cell
1
in vitro differentiated cells
Organ
368
liver
288
pancreas
223
epithelium
54
blood
54
bodily fluid
20
embryo
16
brain
16
spleen
11
connective tissue
8
adipose tissue
4
vasculature
2
blood vessel
Project
11
AMP
Genome assembly (visualization)
10
GRCh38
10
hg19
Lab
11
AMP-T2D consortium
month_released!
August, 2017
target.investigated_as!
control
BIOSAMPLE
ASSAY
11 results
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ChIP-seq
single cell RNA-seq
ATAC-seq
DNase-seq
pCHi-C
tissue
omental fat pad
3
1
1
subcutaneous adipose tissue
2
primary cell
pancreatic stellate cell
3
in vitro differentiated cells
white fat cell
1
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