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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
ChIP-seq
Assay category
54
DNA binding
Target of assay
34
transcription factor
20
histone
20
histone modification
13
narrow histone mark
7
broad histone mark
6
chromatin remodeller
3
RNA binding protein
Date released
39
August, 2017
September, 2018
10
November, 2017
3
October, 2017
2
November, 2018
Available data
54
bam
54
bigWig
54
fastq
16
bed narrowPeak
15
bigBed narrowPeak
14
bed bed3+
3
tagAlign
2
bed broadPeak
Organism
54
Homo sapiens
Biosample type
25
tissue
12
cell line
12
primary cell
5
in vitro differentiated cells
Organ
22
pancreas
17
connective tissue
12
adipose tissue
12
liver
3
brain
Project
54
AMP
Genome assembly (visualization)
54
hg19
47
GRCh38
Lab
54
AMP-T2D consortium
Audit category:
54
missing controlled_by
Audit category:
6
inconsistent control run_type
5
inconsistent control read length
month_released!
September, 2018
BIOSAMPLE
ASSAY
54 results
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Clear Filters
ChIP-seq
tissue
white adipose tissue
12
islet of Langerhans
10
brain
3
cell line
HepG2
12
primary cell
pancreatic endocrine cell
12
in vitro differentiated cells
adipocyte
5
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