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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
71
ChIP-seq
Assay category
71
DNA binding
Target of assay
421
transcription factor
146
control
136
histone modification
135
histone
83
RNA binding protein
82
recombinant protein
71
broad histone mark
64
narrow histone mark
33
chromatin remodeller
5
other context
5
other post-translational modification
Date released
37
August, 2017
September, 2018
11
October, 2018
8
November, 2017
6
October, 2017
4
December, 2017
4
January, 2019
1
August, 2021
Available data
373
bigWig
366
bed narrowPeak
324
bam
235
bigBed narrowPeak
133
tagAlign
70
fastq
36
bed broadPeak
16
bigBed broadPeak
8
bed bed3+
Organism
67
Homo sapiens
Biosample type
45
tissue
in vitro differentiated cells
17
primary cell
8
cell line
1
stem cell
Organ
35
pancreas
19
liver
7
epithelium
6
brain
4
spleen
Project
71
AMP
Genome assembly (visualization)
70
hg19
69
GRCh38
Lab
71
AMP-T2D consortium
Audit category:
8
missing controlled_by
Audit category:
10
inconsistent control read length
2
inconsistent assembly
month_released!
September, 2018
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
71 results
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ChIP-seq
tissue
body of pancreas
11
pancreas
8
liver
7
brain
6
islet of Langerhans
6
+ See 2 more…
primary cell
skeletal muscle myoblast
6
pancreatic endocrine cell
4
pancreatic alpha cell
3
pancreatic beta cell
3
hepatocyte
1
cell line
HepG2
8
stem cell
hESC
1
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