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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
Assay category
66
DNA binding
Target of assay
53
transcription factor
12
RNA binding protein
10
chromatin remodeller
8
control
3
histone
3
histone modification
3
narrow histone mark
Date released
27
December, 2018
18
January, 2019
15
November, 2018
6
November, 2017
Available data
245
bam
210
bigWig
187
bed narrowPeak
137
bigBed narrowPeak
68
tsv
66
fastq
17
bed broadPeak
17
bigBed broadPeak
13
bed bed3+
6
tagAlign
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
1
tar
Organism
66
Homo sapiens
Biosample type
60
cell line
6
primary cell
Organ
465
liver
399
pancreas
196
epithelium
101
connective tissue
60
blood
60
bodily fluid
44
adipose tissue
27
embryo
24
spleen
21
brain
6
vasculature
3
blood vessel
2
musculature of body
Project
66
AMP
Genome assembly (visualization)
60
hg19
58
GRCh38
Lab
66
AMP-T2D consortium
Audit category:
1
inconsistent control
month_released!
September, 2018
BIOSAMPLE
ASSAY
66 results
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ChIP-seq
cell line
GM12878
60
primary cell
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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