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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
349
ChIP-seq
5
total RNA-seq
Assay category
349
DNA binding
5
Transcription
Target of assay
258
transcription factor
66
recombinant protein
63
control
43
RNA binding protein
25
histone
25
histone modification
21
chromatin remodeller
13
narrow histone mark
12
broad histone mark
2
other context
2
other post-translational modification
Date released
324
November, 2017
287
August, 2017
94
December, 2017
88
November, 2018
76
February, 2023
73
September, 2018
60
October, 2018
50
July, 2018
45
February, 2021
44
April, 2018
41
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
24
May, 2022
17
October, 2017
11
September, 2017
7
August, 2020
5
January, 2018
4
August, 2018
3
June, 2018
1
March, 2019
Available data
422
bam
360
bigWig
354
fastq
334
bed narrowPeak
333
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
5
tsv
3
tar
Organism
354
Homo sapiens
Biosample type
338
cell line
9
primary cell
7
tissue
Organ
320
liver
18
blood
18
bodily fluid
9
brain
7
spleen
6
epithelium
6
vasculature
3
blood vessel
Project
354
AMP
Genome assembly (visualization)
301
hg19
249
GRCh38
Lab
354
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
354 results
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Clear Filters
ChIP-seq
total RNA-seq
cell line
HepG2
315
5
GM12878
18
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
tissue
spleen
7
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