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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
162
total RNA-seq
62
single cell RNA-seq
Assay category
785
DNA binding
224
Transcription
70
DNA accessibility
15
DNA methylation
1
3D chromatin structure
Date released
89
August, 2017
39
February, 2023
22
September, 2020
17
July, 2018
15
April, 2018
15
February, 2018
12
February, 2021
6
May, 2022
5
January, 2019
2
June, 2018
1
November, 2018
1
September, 2018
Available data
1396
tsv
1260
bam
1256
bigWig
224
fastq
72
txt
52
zippedFastqFolder
8
csv
2
bed bed3+
Organism
224
Homo sapiens
Biosample type
103
tissue
101
primary cell
15
in vitro differentiated cells
5
cell line
Organ
253
pancreas
epithelium
5
liver
4
embryo
3
connective tissue
Project
151
AMP
73
HPAP
Genome assembly (visualization)
143
GRCh38
143
hg19
Lab
145
AMP-T2D consortium
73
Klaus Kaestner, Upenn
6
Kyle Gaulton, UCSD
Audit category:
6
inconsistent ontology term
organ_slims!
epithelium
BIOSAMPLE
ASSAY
224 results
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total RNA-seq
single cell RNA-seq
tissue
islet of Langerhans
103
primary cell
exocrine cell
39
Langerhans cell
34
pancreatic cell
9
mesenchymal cell
6
pancreatic stellate cell
3
+ See 5 more…
in vitro differentiated cells
pancreatic endoderm
4
definitive endodermal cell
2
embryonic stem cell
2
endocrine cell
2
posterior foregut
2
+ See 2 more…
cell line
HepG2
5
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