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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ChIP-seq
2
DNase-seq
1
ATAC-seq
Assay category
12
DNA binding
3
DNA accessibility
Target of assay
8
histone
8
histone modification
6
broad histone mark
3
control
2
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
10
October, 2017
3
November, 2017
2
November, 2018
Available data
235
bam
213
bigWig
197
bed narrowPeak
121
bigBed narrowPeak
118
tagAlign
41
bed broadPeak
32
bed bed3+
32
bigBed broadPeak
26
tsv
15
fastq
2
hdf5
1
bed bed3
1
bed bedMethyl
1
bigBed bedMethyl
1
tagAlign bed3+
Organism
15
Homo sapiens
Biosample type
12
tissue
3
primary cell
Organ
471
pancreas
liver
257
epithelium
101
connective tissue
60
blood
60
bodily fluid
44
adipose tissue
27
embryo
24
spleen
21
brain
vasculature
3
blood vessel
2
musculature of body
Project
15
AMP
Genome assembly (visualization)
11
GRCh38
11
hg19
Lab
15
AMP-T2D consortium
Audit category:
4
missing controlled_by
organ_slims!
liver
vasculature
BIOSAMPLE
ASSAY
15 results
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ChIP-seq
DNase-seq
ATAC-seq
tissue
brain
9
2
cerebellum (Hemisphere)
1
primary cell
astrocyte of the cerebellum
3
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