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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
4
total RNA-seq
1
GRO-seq
Assay category
21
DNA binding
4
Transcription
Target of assay
11
histone
11
histone modification
7
control
7
narrow histone mark
4
broad histone mark
3
transcription factor
Date released
13
February, 2018
12
December, 2017
1
January, 2018
Available data
35
bam
29
bigWig
26
fastq
14
bed narrowPeak
14
tsv
3
bed bed3+
Organism
26
Homo sapiens
Biosample type
26
in vitro differentiated cells
Organ
452
liver
417
pancreas
236
epithelium
84
connective tissue
60
blood
60
bodily fluid
32
adipose tissue
26
embryo
24
spleen
17
brain
6
vasculature
3
blood vessel
2
musculature of body
Project
26
AMP
Genome assembly (visualization)
19
GRCh38
19
hg19
1
hg18
Lab
26
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
missing controlled_by
Audit category:
3
inconsistent control read length
audit.NOT_COMPLIANT.category!
missing controlled_by
BIOSAMPLE
ASSAY
26 results
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ChIP-seq
total RNA-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm
17
4
1
Hepatic endoderm
4
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