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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ChIP-seq
2
WGBS
1
ATAC-seq
1
DNase-seq
Assay category
23
DNA binding
2
DNA accessibility
2
DNA methylation
Target of assay
9
control
7
histone
7
histone modification
7
transcription factor
4
broad histone mark
3
narrow histone mark
3
other context
3
other post-translational modification
1
RNA binding protein
Date released
9
November, 2018
7
December, 2018
7
January, 2019
3
November, 2017
1
October, 2017
Available data
204
bam
166
bigWig
143
bed narrowPeak
92
bigBed narrowPeak
69
tsv
27
fastq
14
bed broadPeak
14
bigBed broadPeak
12
bed bed3+
6
tagAlign
3
bed bedMethyl
3
bigBed bedMethyl
3
hic
2
bedpe bed3+
2
hdf5
1
tar
Organism
27
Homo sapiens
Biosample type
24
tissue
3
primary cell
Organ
471
pancreas
465
liver
257
epithelium
101
connective tissue
60
blood
60
bodily fluid
44
adipose tissue
27
embryo
24
spleen
21
brain
6
vasculature
3
blood vessel
2
musculature of body
Project
27
AMP
Genome assembly (visualization)
18
GRCh38
17
hg19
Lab
27
AMP-T2D consortium
BIOSAMPLE
ASSAY
27 results
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ChIP-seq
WGBS
ATAC-seq
DNase-seq
tissue
spleen
20
2
1
1
primary cell
brain microvascular endothelial cell
3
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