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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
single cell RNA-seq
2
ChIP-seq
Assay category
7
Transcription
2
DNA binding
Target of assay
2
control
2
histone
histone modification
2
narrow histone mark
Date released
6
July, 2018
2
December, 2017
1
June, 2018
Available data
179
bam
159
bigWig
150
tsv
85
txt
30
bed narrowPeak
9
fastq
7
bedpe bed3+
7
bigBed narrowPeak
6
bed bed3+
5
hic
4
bed broadPeak
4
bigBed broadPeak
3
tagAlign
2
bed bedMethyl
2
bigBed bedMethyl
2
ibed
1
bed bedgraph
Organism
9
Homo sapiens
Biosample type
7
primary cell
2
in vitro differentiated cells
Organ
5
pancreas
3
epithelium
2
embryo
Project
9
AMP
Genome assembly (visualization)
7
GRCh38
7
hg19
Lab
9
AMP-T2D consortium
Audit category:
28
inconsistent control
27
audit script error
9
inconsistent ontology term
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
9 results
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single cell RNA-seq
ChIP-seq
primary cell
co-expressing pancreatic endocrine cell
2
unclassified exocrine cell
2
unclassified pancreatic endocrine cell
2
pancreatic acinar cell
1
in vitro differentiated cells
Hepatic endoderm
2
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