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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
73
ChIP-seq
Assay category
73
DNA binding
Target of assay
73
histone
73
histone modification
40
narrow histone mark
33
broad histone mark
16
control
5
RNA binding protein
5
transcription factor
1
chromatin remodeller
Date released
38
August, 2017
32
September, 2018
3
November, 2017
Available data
230
bigWig
216
bed narrowPeak
203
bam
98
tagAlign
73
fastq
47
bigBed narrowPeak
16
bed broadPeak
16
bigBed broadPeak
3
bed bed3+
Organism
73
Homo sapiens
Biosample type
74
tissue
73
primary cell
65
in vitro differentiated cells
16
cell line
2
stem cell
Organ
58
pancreas
37
epithelium
3
brain
2
vasculature
1
blood vessel
Project
73
AMP
Genome assembly (visualization)
73
GRCh38
73
hg19
Lab
73
AMP-T2D consortium
Audit category:
44
missing controlled_by
Audit category:
5
inconsistent control read length
2
inconsistent assembly
1
inconsistent control run_type
BIOSAMPLE
ASSAY
73 results
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ChIP-seq
primary cell
pancreatic endocrine cell
23
pancreatic ductal cell
13
skeletal muscle myoblast
12
pancreatic acinar cell
8
pancreatic alpha cell
7
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