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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
Assay category
18
DNA binding
Target of assay
244
transcription factor
66
recombinant protein
59
control
37
RNA binding protein
18
histone
18
histone modification
15
chromatin remodeller
10
narrow histone mark
8
broad histone mark
2
other context
2
other post-translational modification
Date released
103
August, 2017
32
September, 2018
31
December, 2017
18
November, 2017
16
February, 2018
16
October, 2018
7
January, 2019
7
October, 2017
Available data
75
bam
75
bigWig
74
bed narrowPeak
73
bigBed narrowPeak
67
tagAlign
23
bed broadPeak
18
fastq
17
bigBed broadPeak
Organism
18
Homo sapiens
Biosample type
15
cell line
3
primary cell
Organ
15
liver
3
brain
2
epithelium
2
vasculature
1
blood vessel
Project
18
AMP
Genome assembly (visualization)
18
hg19
16
GRCh38
Lab
18
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
BIOSAMPLE
ASSAY
18 results
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ChIP-seq
cell line
HepG2
15
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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