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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
ChIP-seq
Assay category
33
DNA binding
Target of assay
65
histone
65
histone modification
33
narrow histone mark
33
transcription factor
31
broad histone mark
22
control
6
RNA binding protein
3
chromatin remodeller
Date released
13
December, 2017
12
August, 2017
8
February, 2018
Available data
41
bam
40
bed narrowPeak
40
bigWig
33
fastq
12
tagAlign
5
bigBed narrowPeak
4
bed bed3+
Organism
33
Homo sapiens
Biosample type
37
primary cell
33
in vitro differentiated cells
28
tissue
1
cell line
1
stem cell
Organ
12
connective tissue
8
embryo
7
epithelium
5
liver
Project
33
AMP
Genome assembly (visualization)
32
GRCh38
32
hg19
Lab
33
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
2
inconsistent control read length
month_released!
November, 2017
BIOSAMPLE
ASSAY
33 results
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ChIP-seq
in vitro differentiated cells
adipocyte
12
pancreatic endoderm
6
hepatocyte
5
Hepatic endoderm
2
definitive endodermal cell
2
primitive gut cell
2
Posterior foregut
1
embryonic stem cell
1
endocrine cell
1
posterior foregut
1
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