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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ATAC-seq
4
Hi-C
Assay category
64
DNA accessibility
4
3D chromatin structure
Date released
64
August, 2021
4
July, 2019
Available data
3389
bam
3125
bigWig
1774
bed narrowPeak
1600
tsv
1355
fastq
1039
bigBed narrowPeak
396
tagAlign
320
bed broadPeak
284
bigBed broadPeak
272
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
4
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
68
Homo sapiens
Biosample type
64
tissue
4
primary cell
Organ
64
kidney
3
brain
2
blood vessel
2
epithelium
2
vasculature
1
connective tissue
1
liver
Project
68
AMP
Genome assembly (visualization)
64
GRCh38
4
hg19
Lab
64
Katalin Susztak, Upenn
4
AMP-T2D consortium
Audit category:
inconsistent assembly
audit.WARNING.category!
inconsistent assembly
BIOSAMPLE
ASSAY
68 results
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ATAC-seq
Hi-C
tissue
kidney
64
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
endothelial cell of hepatic sinusoid
1
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