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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
RRBS
16
WGBS
3
Hi-C
Assay category
35
DNA methylation
3
3D chromatin structure
Date released
24
July, 2019
7
November, 2018
6
August, 2017
1
October, 2019
Available data
3212
bam
2979
bigWig
1648
bed narrowPeak
1532
tsv
1355
fastq
963
bigBed narrowPeak
392
tagAlign
309
bed broadPeak
272
bigBed broadPeak
262
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
35
bed bedMethyl
35
bigBed bedMethyl
21
bedpe bed3+
20
hic
12
bed bed3
8
csv
7
bed bedgraph
3
cool
3
hdf5
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
38
Homo sapiens
Biosample type
24
tissue
12
primary cell
2
cell line
Organ
8
epithelium
8
heart
7
pancreas
5
brain
4
connective tissue
4
kidney
4
liver
4
musculature of body
4
vasculature
blood vessel
2
adipose tissue
2
spleen
1
eye
1
limb
1
pericardium
Project
38
AMP
Genome assembly (visualization)
22
hg19
17
GRCh38
Lab
38
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
inconsistent assembly
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
38 results
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Clear Filters
RRBS
WGBS
Hi-C
tissue
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 10 more…
primary cell
astrocyte of the cerebellum
1
brain pericyte
1
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
+ See 7 more…
cell line
HepG2
1
Panc1
1
See all biosamples
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