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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ChIP-seq
1
Hi-C
Assay category
22
DNA binding
1
3D chromatin structure
Target of assay
19
histone
19
histone modification
12
broad histone mark
7
narrow histone mark
3
control
Date released
22
August, 2017
1
July, 2019
Available data
593
bam
570
bigWig
478
tsv
101
fastq
75
bed narrowPeak
28
bigBed narrowPeak
27
bed bed3+
22
tagAlign
10
bed broadPeak
9
bigBed broadPeak
6
bed bed3
4
bed bedgraph
3
bed bedMethyl
3
bigBed bedMethyl
1
bedpe bed3+
1
hdf5
Organism
23
Homo sapiens
Biosample type
14
in vitro differentiated cells
8
tissue
1
primary cell
Organ
121
brain
87
liver
23
connective tissue
20
pancreas
15
musculature of body
9
epithelium
8
adipose tissue
8
blood vessel
8
vasculature
6
artery
6
heart
1
pituitary gland
Project
23
AMP
Genome assembly (visualization)
2
hg19
Lab
23
AMP-T2D consortium
BIOSAMPLE
ASSAY
23 results
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ChIP-seq
Hi-C
in vitro differentiated cells
adipocyte
14
tissue
subcutaneous abdominal adipose tissue
8
primary cell
brain pericyte
1
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