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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
86
ChIP-seq
1
Hi-C
Assay category
86
DNA binding
1
3D chromatin structure
Target of assay
58
histone
58
histone modification
40
narrow histone mark
28
control
18
broad histone mark
Date released
50
May, 2020
20
August, 2017
12
November, 2017
4
August, 2021
1
July, 2019
Available data
681
bam
622
bigWig
465
fastq
441
bed narrowPeak
358
bigBed narrowPeak
174
tsv
86
tagAlign
63
bed broadPeak
63
bigBed broadPeak
13
bed bed3+
3
bed bedMethyl
3
bigBed bedMethyl
3
tar
2
bedpe bed3+
2
hic
1
bed bed3
1
csv
1
hdf5
1
vcf
Organism
87
Homo sapiens
Biosample type
70
tissue
12
cell line
5
primary cell
Organ
121
brain
87
liver
23
connective tissue
20
pancreas
15
musculature of body
9
epithelium
8
adipose tissue
8
blood vessel
8
vasculature
6
artery
6
heart
1
pituitary gland
Project
87
AMP
Genome assembly (visualization)
43
hg19
31
GRCh38
Lab
87
AMP-T2D consortium
Audit category:
11
inconsistent control read length
BIOSAMPLE
ASSAY
87 results
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ChIP-seq
Hi-C
tissue
liver
70
cell line
HepG2
12
primary cell
hepatocyte
4
endothelial cell of hepatic sinusoid
1
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