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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ChIP-seq
2
Hi-C
Assay category
3
DNA binding
2
3D chromatin structure
Target of assay
3
transcription factor
1
RNA binding protein
Date released
3
November, 2017
1
August, 2021
1
November, 2019
Available data
582
bam
522
bigWig
427
fastq
404
bed narrowPeak
355
bigBed narrowPeak
119
tsv
59
bed broadPeak
59
bigBed broadPeak
20
tagAlign
3
bed bed3+
3
tar
2
bedpe bed3+
2
hic
1
bed bed3
1
bed bedMethyl
1
bigBed bedMethyl
1
hdf5
1
txt
1
vcf
Organism
5
Homo sapiens
Biosample type
11
tissue
7
primary cell
5
cell line
4
in vitro differentiated cells
Organ
4
liver
1
epithelium
1
pancreas
Project
5
AMP
Genome assembly (visualization)
5
hg19
Lab
4
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
5 results
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ChIP-seq
Hi-C
cell line
HepG2
3
1
EndoC_BH1
1
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