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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
Hi-C
5
ATAC-seq
Assay category
11
3D chromatin structure
5
DNA accessibility
Date released
7
March, 2020
5
February, 2023
1
August, 2021
1
March, 2019
1
November, 2019
1
October, 2019
Available data
1907
bam
1732
bigWig
1076
tsv
944
bed narrowPeak
561
bigBed narrowPeak
377
fastq
238
tagAlign
213
bed broadPeak
205
bed bed3+
176
bigBed broadPeak
157
txt
64
xls
25
bed bedMethyl
25
bigBed bedMethyl
11
hic
10
bedpe bed3+
6
csv
5
bed bed3
1
bedpe
1
tagAlign bed3+
Organism
16
Homo sapiens
Biosample type
16
tissue
9
in vitro differentiated cells
7
primary cell
3
cell line
Organ
4
bone element
4
skeleton
3
heart
3
pancreas
2
musculature of body
1
blood vessel
1
brain
1
kidney
1
liver
1
vasculature
Project
16
AMP
Genome assembly (visualization)
16
hg19
Lab
14
AMP-T2D consortium
1
Bing Ren, UCSD
1
Katalin Susztak, Upenn
BIOSAMPLE
ASSAY
16 results
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Clear Filters
Hi-C
ATAC-seq
tissue
islet of Langerhans
2
psoas muscle
2
acetabular part of hip bone
1
aorta
1
brain
1
heart
1
heart left ventricle
1
heart right ventricle
1
ilium
1
ischium
1
kidney
1
liver
1
pancreas
1
pubis
1
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