Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
2
Hi-C
1
WGBS
Assay category
2
3D chromatin structure
1
DNA methylation
Date released
1
August, 2021
1
November, 2018
1
November, 2019
Available data
582
bam
522
bigWig
427
fastq
404
bed narrowPeak
355
bigBed narrowPeak
119
tsv
59
bed broadPeak
59
bigBed broadPeak
20
tagAlign
3
bed bed3+
3
tar
2
bedpe bed3+
2
hic
1
bed bed3
1
bed bedMethyl
1
bigBed bedMethyl
1
hdf5
1
txt
1
vcf
Organism
3
Homo sapiens
Biosample type
36
tissue
16
primary cell
4
in vitro differentiated cells
3
cell line
Organ
2
liver
1
epithelium
1
pancreas
Project
3
AMP
Genome assembly (visualization)
2
hg19
1
GRCh38
Lab
2
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
3 results
search-icon
table-tab-icon
Clear Filters
Hi-C
WGBS
cell line
HepG2
1
1
EndoC_BH1
1
See all biosamples
Download