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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
Hi-C
Assay category
15
3D chromatin structure
Date released
10
March, 2020
October, 2019
2
August, 2021
2
November, 2019
1
March, 2019
Available data
2956
bam
2726
bigWig
1500
bed narrowPeak
1480
tsv
1189
fastq
972
bigBed narrowPeak
313
bed broadPeak
276
bigBed broadPeak
265
bed bed3+
265
tagAlign
161
txt
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
17
bedpe bed3+
15
hic
12
bed bed3
8
csv
7
bed bedgraph
4
hdf5
3
tar
2
ibed
1
bedpe
1
vcf
Organism
15
Homo sapiens
Biosample type
10
tissue
2
cell line
2
in vitro differentiated cells
1
primary cell
Organ
4
pancreas
2
blood vessel
2
epithelium
2
heart
2
liver
2
musculature of body
2
vasculature
1
kidney
1
vein
Project
15
AMP
3
HPAP
1
ITG
Genome assembly (visualization)
15
hg19
Lab
12
AMP-T2D consortium
2
Bing Ren, UCSD
1
Katalin Susztak, Upenn
Audit category:
3
inconsistent ontology term
month_released!
October, 2019
BIOSAMPLE
ASSAY
15 results
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Hi-C
tissue
islet of Langerhans
2
psoas muscle
2
aorta
1
heart left ventricle
1
heart right ventricle
1
+ See 3 more…
cell line
EndoC_BH1
1
HepG2
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
primary cell
endothelial cell of umbilical vein
1
See all biosamples
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