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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
Hi-C
Assay category
7
3D chromatin structure
Date released
10
March, 2020
4
October, 2019
3
October, 2022
2
August, 2021
2
November, 2019
1
March, 2019
1
March, 2023
Available data
250
bam
207
bigWig
bed narrowPeak
70
bigBed narrowPeak
49
tagAlign
16
tsv
9
bed broadPeak
9
bigBed broadPeak
8
bed bed3+
7
hic
6
bedpe bed3+
3
cool
1
hdf5
1
tagAlign bed3+
1
tar
1
txt
Organism
7
Homo sapiens
Biosample type
4
primary cell
2
in vitro differentiated cells
1
tissue
Organ
4
epithelium
3
pancreas
1
blood vessel
1
heart
1
vasculature
1
vein
Project
4
AMP
3
HPAP
Genome assembly (visualization)
7
hg19
Lab
4
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
4
audit script error
2
inconsistent ontology term
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
7 results
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Clear Filters
Hi-C
primary cell
endothelial cell of umbilical vein
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
tissue
heart
1
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