Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
Hi-C
Assay category
13
3D chromatin structure
Date released
7
March, 2020
3
October, 2019
2
August, 2021
1
March, 2023
Available data
2492
bam
2322
bigWig
1412
bed narrowPeak
1015
tsv
887
fastq
857
bigBed narrowPeak
373
tagAlign
271
bed broadPeak
248
bigBed broadPeak
214
bed bed3+
155
txt
73
zippedFastqFolder
64
xls
22
bed bedMethyl
22
bigBed bedMethyl
13
bedpe bed3+
13
hic
12
bed bed3
8
csv
7
bed bedgraph
4
hdf5
4
tar
2
ibed
1
tagAlign bed3+
1
vcf
Organism
13
Homo sapiens
Biosample type
5
tissue
4
in vitro differentiated cells
3
primary cell
1
cell line
Organ
pancreas
6
epithelium
3
blood vessel
heart
3
vasculature
2
liver
2
musculature of body
2
vein
1
kidney
Project
12
AMP
1
ITG
Genome assembly (visualization)
12
hg19
1
GRCh38
Lab
10
AMP-T2D consortium
1
Bing Ren, UCSD
1
ITG
1
Katalin Susztak, Upenn
Audit category:
4
inconsistent ontology term
1
audit script error
organ_slims!
pancreas
heart
BIOSAMPLE
ASSAY
13 results
search-icon
table-tab-icon
Clear Filters
Hi-C
tissue
psoas muscle
2
aorta
1
kidney
1
liver
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
cardiac precursors (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
primary cell
endothelial cell of umbilical vein
2
chondrocytes
1
cell line
HepG2
1
Download