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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
74
ChIP-seq
47
ATAC-seq
30
DNase-seq
3
Hi-C
Assay category
77
DNA accessibility
74
DNA binding
3
3D chromatin structure
Target of assay
62
histone
62
histone modification
37
broad histone mark
25
narrow histone mark
12
transcription factor
6
RNA binding protein
Date released
47
April, 2019
35
February, 2023
33
June, 2019
15
May, 2019
12
February, 2021
6
October, 2019
4
July, 2019
2
March, 2020
Available data
211
bam
184
bigWig
168
tsv
151
bed narrowPeak
94
bigBed narrowPeak
30
bed bed3+
30
bed broadPeak
30
bigBed broadPeak
8
bed bedMethyl
8
bigBed bedMethyl
6
tagAlign
3
bedpe bed3+
3
hic
Organism
154
Homo sapiens
Biosample type
136
tissue
12
cell line
6
primary cell
Organ
443
liver
221
pancreas
203
brain
184
kidney
157
epithelium
154
heart
136
vasculature
132
blood vessel
92
limb
75
connective tissue
74
artery
62
musculature of body
54
blood
54
bodily fluid
33
eye
27
nerve
18
ureter
15
vein
14
embryo
14
spleen
13
adipose tissue
8
bone element
8
skeleton
1
pituitary gland
Project
154
AMP
Genome assembly (visualization)
150
GRCh38
116
hg19
Lab
154
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
BIOSAMPLE
ASSAY
154 results
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ChIP-seq
ATAC-seq
DNase-seq
Hi-C
tissue
coronary artery
3
36
2
heart left ventricle
29
2
3
1
heart
12
18
1
heart right ventricle
11
1
1
right atrium auricular region
7
1
2
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cell line
smooth muscle cell of the coronary artery
4
8
primary cell
cardiac fibroblast
3
3
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