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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
Hi-C
Assay category
7
3D chromatin structure
Date released
3
October, 2022
2
March, 2020
1
November, 2019
1
October, 2019
Available data
472
bam
429
bigWig
264
bed narrowPeak
257
fastq
223
tsv
139
bigBed narrowPeak
80
zippedFastqFolder
28
bed broadPeak
28
bigBed broadPeak
27
bed bed3+
13
tagAlign
7
bed bedMethyl
7
bigBed bedMethyl
7
hic
6
bedpe bed3+
3
cool
2
hdf5
1
tar
Organism
7
Homo sapiens
Biosample type
5
primary cell
1
cell line
1
tissue
Organ
7
pancreas
6
epithelium
3
blood vessel
3
heart
3
vasculature
2
liver
2
musculature of body
2
vein
1
kidney
Project
4
AMP
3
HPAP
Genome assembly (visualization)
7
hg19
Lab
4
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
4
audit script error
1
inconsistent ontology term
BIOSAMPLE
ASSAY
7 results
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Hi-C
primary cell
endothelial cell of umbilical vein
2
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
cell line
EndoC_BH1
1
tissue
aorta
1
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