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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
2
pCHi-C
1
whole genome sequencing assay
Assay category
DNA accessibility
1
DNA sequencing
Date released
2
March, 2020
1
August, 2021
Available data
3003
bam
2819
bigWig
1586
tsv
1325
bed narrowPeak
1256
fastq
801
bigBed narrowPeak
398
tagAlign
157
txt
114
bed broadPeak
93
zippedFastqFolder
79
bigBed broadPeak
64
bed bed3+
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
8
csv
5
hdf5
3
cool
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
0
bed bedgraph
Organism
3
Homo sapiens
Biosample type
2
in vitro differentiated cells
1
cell line
Organ
1
liver
Project
3
AMP
Genome assembly (visualization)
2
hg19
Lab
2
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
2
inconsistent ontology term
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
3 results
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Clear Filters
pCHi-C
whole genome sequencing assay
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
cell line
HepG2
1
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