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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ChIP-seq
3
Hi-C
Assay category
6
DNA binding
3
3D chromatin structure
Target of assay
2
RNA binding protein
2
control
2
histone
2
histone modification
2
narrow histone mark
2
transcription factor
Date released
6
November, 2017
2
March, 2020
1
October, 2019
Available data
185
bam
155
bigWig
133
bed narrowPeak
83
bigBed narrowPeak
68
tsv
17
bed broadPeak
17
bigBed broadPeak
13
bed bed3+
6
fastq
6
tagAlign
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
1
tar
0
ibed
Organism
9
Homo sapiens
Biosample type
8
primary cell
1
tissue
Organ
478
pancreas
467
liver
263
epithelium
101
connective tissue
60
blood
60
bodily fluid
44
adipose tissue
27
embryo
24
spleen
21
brain
9
vasculature
6
blood vessel
4
musculature of body
3
heart
2
vein
1
kidney
Project
9
AMP
Genome assembly (visualization)
9
hg19
4
GRCh38
Lab
9
AMP-T2D consortium
Audit category:
1
audit script error
BIOSAMPLE
ASSAY
9 results
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ChIP-seq
Hi-C
primary cell
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
endothelial cell of umbilical vein
2
tissue
aorta
1
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