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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
227
ChIP-seq
Assay category
227
DNA binding
Target of assay
227
histone
227
histone modification
142
narrow histone mark
85
broad histone mark
9
transcription factor
2
control
Date released
85
May, 2021
40
October, 2019
37
August, 2017
27
May, 2020
17
November, 2017
15
August, 2021
6
October, 2017
Available data
782
bigWig
763
bed narrowPeak
727
bam
339
bigBed narrowPeak
228
fastq
227
tagAlign
65
bed broadPeak
30
bigBed broadPeak
25
bed bed3+
1
tagAlign bed3+
Organism
221
Homo sapiens
Biosample type
105
tissue
98
primary cell
13
in vitro differentiated cells
11
cell line
Organ
43
brain
41
liver
13
musculature of body
13
pancreas
4
epithelium
1
adipose tissue
1
connective tissue
1
pituitary gland
Project
143
AMP
84
T1D
Genome assembly (visualization)
237
GRCh38
227
hg19
Lab
143
AMP-T2D consortium
84
Kyle Gaulton, UCSD
Audit category:
3
missing controlled_by
Audit category:
11
inconsistent control read length
2
inconsistent assembly
BIOSAMPLE
ASSAY
227 results
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ChIP-seq
tissue
liver
27
skeletal muscle tissue
13
brain
6
islet of Langerhans
6
pancreas
6
+ See 43 more…
primary cell
monocyte
84
skeletal muscle myoblast
11
hepatocyte
3
in vitro differentiated cells
neural progenitor cell
12
pancreatic PP cell
1
cell line
HepG2
11
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