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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
310
ChIP-seq
Assay category
310
DNA binding
Target of assay
310
histone
310
histone modification
169
narrow histone mark
141
broad histone mark
68
control
9
transcription factor
Date released
85
May, 2021
74
August, 2017
56
November, 2017
40
October, 2019
27
May, 2020
16
August, 2021
12
October, 2017
Available data
802
bigWig
786
bed narrowPeak
753
bam
375
bigBed narrowPeak
310
tagAlign
198
fastq
54
bed broadPeak
19
bed bed3+
19
bigBed broadPeak
1
tagAlign bed3+
Organism
304
Homo sapiens
Biosample type
186
tissue
98
primary cell
26
in vitro differentiated cells
Organ
99
brain
47
liver
19
connective tissue
15
pancreas
13
musculature of body
7
adipose tissue
4
epithelium
1
pituitary gland
Project
226
AMP
84
T1D
Genome assembly (visualization)
228
GRCh38
216
hg19
Lab
226
AMP-T2D consortium
84
Kyle Gaulton, UCSD
Audit category:
4
missing controlled_by
Audit category:
inconsistent control read length
2
inconsistent assembly
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
310 results
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Clear Filters
ChIP-seq
tissue
liver
44
substantia nigra
14
caudate nucleus
13
layer of hippocampus
13
skeletal muscle tissue
13
+ See 43 more…
primary cell
monocyte
84
skeletal muscle myoblast
11
hepatocyte
3
in vitro differentiated cells
neural progenitor cell
13
adipocyte
12
pancreatic PP cell
1
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