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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
238
ChIP-seq
176
DNase-seq
Assay category
238
DNA binding
176
DNA accessibility
Target of assay
186
histone
186
histone modification
110
narrow histone mark
76
broad histone mark
52
control
Date released
163
June, 2019
66
November, 2017
59
August, 2017
53
October, 2019
50
May, 2020
14
October, 2017
9
November, 2018
Available data
1907
bam
1732
bigWig
1076
tsv
944
bed narrowPeak
561
bigBed narrowPeak
377
fastq
238
tagAlign
213
bed broadPeak
205
bed bed3+
176
bigBed broadPeak
157
txt
64
xls
25
bed bedMethyl
25
bigBed bedMethyl
11
hic
10
bedpe bed3+
6
csv
5
bed bed3
1
bedpe
1
tagAlign bed3+
Organism
407
Homo sapiens
Biosample type
414
tissue
138
primary cell
68
cell line
41
in vitro differentiated cells
Organ
145
brain
73
liver
68
kidney
47
musculature of body
36
limb
27
heart
22
pancreas
18
ureter
10
adipose tissue
10
connective tissue
5
blood vessel
5
vasculature
4
artery
3
eye
2
nerve
1
pituitary gland
1
spleen
Project
414
AMP
Genome assembly (visualization)
292
GRCh38
265
hg19
Lab
414
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
4
missing controlled_by
Audit category:
1
inconsistent assembly
BIOSAMPLE
ASSAY
414 results
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ChIP-seq
DNase-seq
tissue
liver
70
2
brain
14
14
heart
18
muscle of arm
17
caudate nucleus
15
1
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