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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ChIP-seq
1
WGBS
Assay category
6
DNA binding
1
DNA methylation
Target of assay
4
control
2
histone
2
histone modification
1
broad histone mark
1
narrow histone mark
Date released
3
February, 2021
3
November, 2017
1
November, 2018
Available data
582
bam
522
bigWig
427
fastq
bed narrowPeak
355
bigBed narrowPeak
119
tsv
59
bed broadPeak
59
bigBed broadPeak
20
tagAlign
3
bed bed3+
3
tar
2
bedpe bed3+
2
hic
1
bed bed3
1
bed bedMethyl
1
bigBed bedMethyl
1
hdf5
1
txt
1
vcf
Organism
7
Homo sapiens
Biosample type
118
tissue
22
in vitro differentiated cells
12
primary cell
7
cell line
Organ
4
liver
2
artery
2
blood vessel
2
heart
2
vasculature
Project
7
AMP
Genome assembly (visualization)
3
hg19
1
GRCh38
Lab
7
AMP-T2D consortium
Audit category:
2
inconsistent control read length
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
7 results
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ChIP-seq
WGBS
cell line
HepG2
3
1
smooth muscle cell of the coronary artery
2
iPSC derived cell line
1
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