Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
ChIP-seq
2
ATAC-seq
1
DNase-seq
Assay category
54
DNA binding
3
DNA accessibility
Target of assay
38
histone
38
histone modification
21
broad histone mark
17
narrow histone mark
10
control
6
transcription factor
2
RNA binding protein
1
chromatin remodeller
Date released
20
August, 2021
15
August, 2017
14
December, 2017
6
May, 2021
2
October, 2019
Available data
291
bam
259
bigWig
141
fastq
132
bed narrowPeak
131
tsv
40
tagAlign
25
bed bed3+
17
bigBed narrowPeak
7
bed bedgraph
7
bedpe bed3+
5
bed bed3
4
hic
3
txt
2
ibed
1
bed broadPeak
1
bigBed broadPeak
Organism
57
Homo sapiens
Biosample type
742
tissue
366
cell line
198
primary cell
57
in vitro differentiated cells
Organ
17
connective tissue
17
epithelium
14
liver
3
pancreas
Project
57
AMP
Genome assembly (visualization)
34
hg19
33
GRCh38
Lab
57
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
BIOSAMPLE
ASSAY
57 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
in vitro differentiated cells
neural progenitor cell
20
adipocyte
14
2
1
hepatocyte
14
cardiomyocytes
3
pancreatic PP cell
3
Download