Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
173
total RNA-seq
90
ChIP-seq
Assay category
173
Transcription
90
DNA binding
Target of assay
85
histone
85
histone modification
44
broad histone mark
41
narrow histone mark
4
transcription factor
1
control
Date released
567
February, 2021
263
May, 2021
239
May, 2020
174
August, 2017
164
July, 2018
147
August, 2021
78
November, 2017
65
July, 2019
65
October, 2019
49
April, 2018
45
March, 2020
26
September, 2018
25
February, 2020
20
November, 2019
16
February, 2023
15
February, 2018
14
October, 2017
9
December, 2019
5
January, 2019
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
Available data
303
bigWig
277
bam
173
tsv
133
bed narrowPeak
90
tagAlign
2
bed bed3+
Organism
263
Homo sapiens
Biosample type
136
primary cell
85
in vitro differentiated cells
38
tissue
4
cell line
Organ
43
pancreas
9
epithelium
3
heart
2
embryo
1
connective tissue
Project
135
T1D
128
AMP
Genome assembly (visualization)
262
GRCh38
262
hg19
Lab
135
Kyle Gaulton, UCSD
128
AMP-T2D consortium
Audit category:
72
inconsistent ontology term
BIOSAMPLE
ASSAY
263 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
primary cell
monocyte
51
84
embryonic stem cell
1
in vitro differentiated cells
cardiomyocytes
59
3
induced pluripotent stem cell
9
pancreatic PP cell
3
cardiac fibroblast
1
cardiomyocytes (cardiac muscle cell)
1
+ See 9 more…
tissue
islet of Langerhans
36
cardiac atrium
1
cardiac ventricle
1
cell line
EndoC_BH1
4
See all biosamples
Download