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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
153
ChIP-seq
Assay category
153
DNA binding
Target of assay
88
histone
88
histone modification
65
control
58
broad histone mark
30
narrow histone mark
Date released
60
November, 2017
40
August, 2017
23
May, 2020
9
August, 2021
9
October, 2019
8
October, 2017
3
February, 2021
1
May, 2021
Available data
364
bam
318
fastq
210
bed narrowPeak
195
tsv
157
txt
153
tagAlign
153
zippedFastqFolder
142
bigWig
75
bigBed narrowPeak
64
xls
24
bed broadPeak
23
bed bed3+
23
bigBed broadPeak
15
bed bedMethyl
15
bigBed bedMethyl
8
csv
1
bedpe bed3+
1
hic
1
vcf
Organism
152
Homo sapiens
Biosample type
126
tissue
23
in vitro differentiated cells
3
cell line
1
primary cell
Organ
75
brain
44
liver
21
connective tissue
adipose tissue
5
pancreas
2
artery
2
blood vessel
2
epithelium
2
heart
2
musculature of body
2
vasculature
Project
153
AMP
Genome assembly (visualization)
237
GRCh38
hg19
Lab
153
AMP-T2D consortium
Audit category:
1
missing controlled_by
organ_slims!
adipose tissue
target.investigated_as!
transcription factor
assembly!
hg19
BIOSAMPLE
ASSAY
153 results
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ChIP-seq
tissue
liver
43
caudate nucleus
14
layer of hippocampus
14
substantia nigra
14
cingulate gyrus
12
+ See 14 more…
in vitro differentiated cells
adipocyte
14
neural progenitor cell
8
pancreatic PP cell
1
cell line
smooth muscle cell of the coronary artery
2
iPSC derived cell line
1
primary cell
hepatocyte
1
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